@ewels, can you please allow me to push to your branch? Tried fixing the merge conflicts in the requirements files

@ewels, can you please allow me to push to your branch? Tried fixing the merge conflicts in the requirements files

Should already be allowed?

Anyway, I just fixed it 👍🏻

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@nf-core-bot fix linting

I don't really know yet. In a perfect world, we would somehow have Trogan as part of the larger TUI framework that we're building. But I'm not sure that this will be possible (very likely not).

I just sort of figured that it didn't hurt to add 👀 If we ever get to the point where we have custom TUI interfaces for all commands then we can remove it. I suspect that we will never get there though, and the custom TUI stuff will only be worth investing in for cases where it really adds a lot of value. In which case, this adds a nice halfway-point for all the other commands.

Could do with some nice way to switch between custom TUI and Trogan though. Wonder if we could have a button that closes our TUI and launches the Trogan TUI or something 🤔 (so effectively a button to switch).

Sounds good. Indeed, it doesn't hurt to add it. And we can later try to add this button to switch to Trogan :)